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- QIIME 2 Homepage
QIIME 2 is pronounced “chime two” It is an AI-ready microbiome multi-omics data science platform that is free, open source, extensible, and community-developed QIIME 2 enables researchers to conduct reproducible microbiome analysis using a variety of interfaces and tools
- QIIME Tutorials — Homepage
The QIIME tutorials illustrate how to use various features of QIIME We recommend that all users begin with either the QIIME Illumina Overview Tutorial or the QIIME 454 Overview Tutorial These tutorials take the user through a full analysis of sequencing data
- Getting started - Using QIIME 2
The tutorials in Using QIIME 2 provide basic information on how to use the QIIME 2 framework, q2cli (i e , the official QIIME 2 command line interface), and the QIIME 2 Python 3 API The tutorials make use of the Tiny Distribution, and the QIIME 2 example plugin q2-dwq2
- Getting started — Using QIIME 2
The tutorials in Using QIIME 2 provide basic information on how to use the QIIME 2 framework, q2cli (i e , the official QIIME 2 command line interface), and the QIIME 2 Python 3 API The tutorials make use of the Tiny Distribution, and the QIIME 2 example plugin q2-dwq2
- QIIME 2 2024. 5 is now available!
The QIIME 2 2024 5 release is now available! Thanks to everyone involved for their hard work! Following this release, we are transitioning to a twice-per-year release schedule where releases are scheduled for the first Wednesday of April and October
- Getting started with QIIME 2 - Microbiome marker gene analysis with QIIME 2
What most people think of as “QIIME 2” is what we refer to in our documentation as the amplicon distribution of QIIME 2, or simply the amplicon distribution This is the microbiome marker gene analysis toolkit
- QIIME 2 View
QIIME 2 View (or q2view for short) is an entirely client-side interface for viewing QIIME 2 artifacts and visualizations ( qza qzv files respectively) This means that you do not need to have a working QIIME 2 installation to inspect QIIME 2 results
- Introduction to QIIME 2 - SpringerLink
In this chapter, we provide the foundations of the QIIME 2 approach to bioinformatic and statistical analysis of microbiome data We first provide an overview of QIIME 2 (Sect 1 1) Then we introduce the core concepts in QIIME 2 (Sect 1 2) Next, we introduce how to install QIIME 2 (Sect 1 3)
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