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Basic Local Alignment Search Tool - BLAST The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches
BLAST (biotechnology) - Wikipedia BLAST (biotechnology) In bioinformatics, BLAST (basic local alignment search tool) [3] is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins , nucleotides of DNA and or RNA sequences
BLAST+ executables — BLASTHelp documentation The NCBI provides a suite of command-line tools to run BLAST called BLAST+ This allows users to perform BLAST searches on their own server without size, volume and database restrictions
NCBI Bioinformatics Resources: An Introduction: BLAST: Compare . . . BLASTp (Protein BLAST): compares one or more protein query sequences to a subject protein sequence or a database of protein sequences This is useful when trying to identify a protein (see From sequence to protein and gene below)
BLAST Quick Start - National Library of Medicine Descriptions shows database matches sorted by significance (BLAST Score and Expect value) BLAST Score — the sum of the match scores (positive), mismatch and gap penalties (negative) in the BLAST aligment
BLAST in Bioinformatics: Types, Steps Applications Explore BLAST (Basic Local Alignment Search Tool) in bioinformatics: its definition, five types, working steps, and key applications in sequence analysis
BLAST - Bioinformatics. Org Wiki The original BLAST algorithm used the PAM40 matrix for nucleotide sequences This included a +5 reward for matches, and a -4 penalty for mismatches, which are added
BLAST for beginners - Digital World Biology BLAST for beginners introduces students to blastn, a commonly used tool for comparing nucleotide sequences (DNA and RNA) This popular tutorial shows how to do a blast search with a nucleotide sequence, highlights information in the search results, and shows how to interpret the E value and alignment scores